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spatial transcriptomics visium output files and deconvolution data  (Spatial Transcriptomics Inc)

 
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    Spatial Transcriptomics Inc spatial transcriptomics visium output files and deconvolution data
    Spatial Transcriptomics Visium Output Files And Deconvolution Data, supplied by Spatial Transcriptomics Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/spatial+files/spatial+transcriptomics+deconvolution/10__1161_slash_atvbaha__124__321781-64-6-0
    Average 90 stars, based on 1 article reviews
    spatial transcriptomics visium output files and deconvolution data - by Bioz Stars, 2026-11
    90/100 stars

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    Related Articles

    Spatial Transcriptomics:

    Article Title: Integrated Single-Cell and Spatial Transcriptomic Analysis Reveals an Aging-Associated Fibroblast Subtype Linked to Tumor Progression in Human Skin
    Article Snippet: .. Raw Visium spatial transcriptomics data (BCL and FASTQ files) were processed using the SpaceRanger v1.3.1 pipeline (10x Genomics). ..

    Article Title: Spatial multimodal analysis of transcriptomes and metabolomes in tissues
    Article Snippet: .. Spatial transcriptomics raw sequencing data, microscope images and spaceranger output files of the mouse and human samples are available at Figshare (10.17044/scilifelab.22778920). ..

    Article Title: Single-Cell Meta-Analysis Uncovers the Pancreatic Endothelial Cell Transcriptomic Signature and Reveals a Key Role for NKX2-3 in PLVAP Expression
    Article Snippet: .. Spatial transcriptomics Visium output files and deconvolution data were obtained from ( https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE197317 ). ..

    other:

    Article Title: Functional plasticity and recurrent cell states of malignant B cells in follicular lymphoma
    Article Snippet: Spatial transcriptomics fastq files were first aligned on the GRCh38-3.0.0 reference by SpaceRanger v1.2.2 after manual registration of the H&E image using Loupe browser 5.0.

    Article Title: A cellular hierarchy in melanoma uncouples growth and metastasis.
    Article Snippet: Raw data of scRNA-seq (and output files from CellRanger) and spatial transcriptomics (Visium and stereo-seq) are deposited at the GEO under accession number GSE207592.

    Sequencing:

    Article Title: Spatial multimodal analysis of transcriptomes and metabolomes in tissues
    Article Snippet: .. Spatial transcriptomics raw sequencing data, microscope images and spaceranger output files of the mouse and human samples are available at Figshare (10.17044/scilifelab.22778920). ..

    Microscopy:

    Article Title: Spatial multimodal analysis of transcriptomes and metabolomes in tissues
    Article Snippet: .. Spatial transcriptomics raw sequencing data, microscope images and spaceranger output files of the mouse and human samples are available at Figshare (10.17044/scilifelab.22778920). ..



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